Well, everyone has a seat facing the front of the space craft with rear and side head restraints kind of like what you'd find in a Sprint Cup car. The side head restraints are going to be made out of some kind of plastic so it doesn't block the view of the pilots. Also, the rear head restraints are will give slightly under high accelerative g's. The head restraints are kind of a new idea aboard the star ship though.
You have forgotten about the star ships defence system. Just send another missile to intersect it and the space craft is still in one piece. Also, my next space craft will be made for combat and will have several layers of armor to protect itself along with the plasma shield.