Oh you know, what happened a few months ago is that we got rid of separate MCC vs non-MCC scenarios. All launch scenarios are now MCC scenarios, at least those missions that support it (Apollo 7-11, Apollo 12 experimentally). And if you would want to deactivate the MCC and fly an Apollo 7-11 mission with the RTCC MFD instead then you can disable the MCC in the CAPCOM menu.
When we got rid of the non-MCC scenarios we actually renamed the MCC scenarios and removed the MCC from the name. What you have there with "Apollo 11 MCC Launch" is an old scenario you still had from a previous NASSP install. Look here, in the main NASSP folder in the most current version there are only 5 scenarios, for Apollo 7-11:
https://github.com/orbiternassp/NASSP/tree/Orbiter2016/Scenarios/Project Apollo - NASSP
I would recommend deleting the scenarios with MCC in the name there, as they are not part of NASSP anymore and won't be updated. "Apollo 11 - Launch.scn" is now the scenario you want, the MCC is activated in it.